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Joint Fluid Pathogen Panel, Molecular Detection

Test Catalog Information

Test Catalog Synonyms

Joint Infection, Infected Joint, Synovial

EPIC Synonyms synovial
Joint PCR
Joint Infection, Infected Joint, Synovial
septic arthritis
prosthetic
shoulder
synovium
knee
Joint PCR Panel
hip
Cerner Primary MnemonicJoint PCR Panel
EPIC Display NameJoint Fluid Pathogen Panel, Molecular Detection
Allscripts (AEHR) Order Name

Joint PCR Panel

Sunrise Clinical Manager (SCM) Order Name

Joint PCR Panel

EPIC Inpatient Orderable Yes
EPIC Outpatient Orderable Yes
Cerner Results Citrobacter spp.
Morganella morganii
Klebsiella pneumoniae group
VIM (Carbapenemase)
Cutibacterium avidum/granulosum
Peptostreptococcus anaerobius
Streptococcus pyogenes
Kingella kingae
Klebsiella aerogenes
Pseudomonas aeruginosa
Enterobacter cloacae complex
Serratia marcescens
ESBL
Haemophilus influenzae
CTX-M
Anaerococcus prevotii/vaginalis
Enterococcus faecium (VRE)
Proteus spp.
Enterococcus faecalis
Bacteroides fragilis
Streptococcus spp.
Candida spp.
Carbapenem resistance
Neisseria gonorrhoeae
Staphylococcus aureus (MSSA)
KPC (Carbapenemase)
Clostridium perfringens
Escherichia coli
IMP (Carbapenemase)
Joint PCR Source
Streptococcus agalactiae
Finegoldia magna
OXA-48-like (Carbapenemase)
Staphylococcus lugdunensis
Methicillin Resistant S. aureus (MRSA)
Streptococcus pneumoniae
Candida albicans
Peptoniphilus spp.
NDM (Carbapenemase)
Joint PCR Panel
Enterococcus faecalis (VRE)
Enterococcus faecium
Parvimonas micra
Salmonella spp.
Clinical Info

This is a multiplex PCR which detects the following organisms/resistance genes in infected joint fluid: Anaerococcus prevotii/vaginalis, Clostridium perfringens,  Cutibacterium avidum/granulosum, Enterococcus faecalis (including VRE), Enterococcus faecium (including VRE), Finegoldia magna, Parvimonas micra, Peptoniphilus spp.,  Peptostreptococcus anaerobius, Staphylococcus aureus (including MRSA), Staphylococcus lugdunensis, Streptococcus pyogenes (GAS), Streptococcus agalactiae (GBS),  Streptococcus pneumoniae, other Streptococcus species at the genus level, Bacteroides fragilis, Citrobacter spp., Enterobacter cloacae complex, Escherichia coli,  Haemophilus influenzae, Kingella kingae, Klebsiella aerogenes, Klebsiella pneumoniae group, Morganella morganii, Neisseria gonorrhoeae, Proteus spp., Pseudomonas  aeruginosa, Salmonella spp., Serratia marcescens, Candida albicans, other Candida species at the genus level, Carbapenemases (KPC, OXA-48-like, NDM, VIM, IMP) and Extended Spectrum Beta-Lactamases (CTX-M). Please indicate Specimen Type/Source (Knee, hip, etc) when ordering.  The Joint PCR Panel is intended as an aid to diagnosis of infected joint.  The assay detects  multiple bacteria and yeast organisms, and should be utilized in conjunction with a Joint Culture.  Lab results should interpreted in the context of the patient's clinical  presentation, history, and other tests.      

Specimen Type

Body Fluid, Other

Container

Sterile

Collection Instructions

Sterilely transfer at least 0.5 mL synovial fluid into a sterile screw top container or tube. This may be combined with sample for Joint Culture.   But should be sent separately from other other synovial fluid tests such as cell count, etc. .  

Transport Instructions

Refrigerate (2-8 C)

Specimen Stability

Refrigerate (2-8 C) 3 days; Frozen (-20 C or lower) for longer storage

Methodology

Mutliplex Nucleic Acid Amplification by Polymerase Chain Reaction

Days Performed

Monday to Sunday

Performing Laboratory

Northwell Health Laboratories-Little Neck Parkway

CPT

PDM

237266

Desired Epic Build Joint Fluid Pathogen Panel, Molecular Detection

Cerner Primary Mnemonic: Joint PCR Panel
PDM 237266
Informatics - WorkgroupID Molecular
Synonyms *synovial
Joint PCR
Joint Infection, Infected Joint, Synovial
septic arthritis
prosthetic
shoulder
synovium
knee
Joint PCR Panel
hip
Display Name *Joint Fluid Pathogen Panel, Molecular Detection
Order Entry Specimen Sources *
Ankle L
Ankle R
Elbow L
Elbow R
Finger Left
Finger Right
Foot L
Foot R
Hand L
Hand R
Hip L
Hip R
Jaw Left
Jaw Right
Knee L
Knee R
Shoulder L
Shoulder R
Toe L
Toe R
Vertebra
Wrist L
Wrist R
Order Entry Specimen Types
Body Fluid
Specimen Navigator Specimen Types
Specimen Navigator Specimen Sources
Specimen Navigator Short NamePCR Panel Joint
Ordering info (EPIC SmartText) This is a multiplex PCR which detects the following organisms/resistance genes in infected joint fluid: Anaerococcus prevotii/vaginalis, Clostridium perfringens,  Cutibacterium avidum/granulosum, Enterococcus faecalis (including VRE), Enterococcus faecium (including VRE), Finegoldia magna, Parvimonas micra, Peptoniphilus spp.,  Peptostreptococcus anaerobius, Staphylococcus aureus (including MRSA), Staphylococcus lugdunensis, Streptococcus pyogenes (GAS), Streptococcus agalactiae (GBS),  Streptococcus pneumoniae, other Streptococcus species at the genus level, Bacteroides fragilis, Citrobacter spp., Enterobacter cloacae complex, Escherichia coli,  Haemophilus influenzae, Kingella kingae, Klebsiella aerogenes, Klebsiella pneumoniae group, Morganella morganii, Neisseria gonorrhoeae, Proteus spp., Pseudomonas  aeruginosa, Salmonella spp., Serratia marcescens, Candida albicans, other Candida species at the genus level, Carbapenemases (KPC, OXA-48-like, NDM, VIM, IMP) and Extended Spectrum Beta-Lactamases (CTX-M). Please indicate Specimen Type/Source (Knee, hip, etc) when ordering.  The Joint PCR Panel is intended as an aid to diagnosis of infected joint.  The assay detects  multiple bacteria and yeast organisms, and should be utilized in conjunction with a Joint Culture.  Lab results should interpreted in the context of the patient's clinical  presentation, history, and other tests.      
IP Orderable Yes
OP Orderable Yes
AOEs *

AP AOEs
Special History No
Build Comments
Filter *
Procedure Category Change
Cerner Results

Result DescResult displayResult PDM
Cit Citrobacter spp. 237266V
Mormor Morganella morganii 237266AC
Klepnegr Klebsiella pneumoniae group 237266AB
VIM VIM (Carbapenemase) 237266AO
Cutavigra Cutibacterium avidum/granulosum 237266E
Pepstrana Peptostreptococcus anaerobius 237266M
Strpyo Streptococcus pyogenes 237266T
Kinkin Kingella kingae 237266Z
Kleaer Klebsiella aerogenes 237266AA
Pseaer Pseudomonas aeruginosa 237266AF
Entclocom Enterobacter cloacae complex 237266W
Sermar Serratia marcescens 237266AH
ESBL ESBL 237266AQ
Hae inf Haemophilus influenzae 237266Y
CTX-M CTX-M 237266AP
Anaprevag Anaerococcus prevotii/vaginalis 237266C
Entfaecium VanA/B Enterococcus faecium (VRE) 237266I
Pros Proteus spp. 237266AE
Entfaecalis Enterococcus faecalis 237266F
Bacfra Bacteroides fragilis 237266U
Strsp Streptococcus spp. 237266Q
Cans Candida spp. 237266AI
MDRO Carbapenem resistance 237266AR
Neigon Neisseria gonorrhoeae 237266AD
Staaur Staphylococcus aureus (MSSA) 237266N
KPC KPC (Carbapenemase) 237266AL
Cloper Clostridium perfringens 237266D
Esccol Escherichia coli 237266X
IMP IMP (Carbapenemase) 237266AK
SOURCE JOINT Joint PCR Source 237266A
Str aga Streptococcus agalactiae 237266R
Finmag Finegoldia magna 237266J
OXA OXA-48-like (Carbapenemase) 237266AN
Stalug Staphylococcus lugdunensis 237266P
Staaur mecA/C and MREJ Methicillin Resistant S. aureus (MRSA) 237266O
Strepne Streptococcus pneumoniae 237266S
Canalb Candida albicans 237266AJ
Pep Peptoniphilus spp. 237266L
NDM NDM (Carbapenemase) 237266AM
JOINTPCR Joint PCR Panel 237266B
Entfaecalis VanA/B Enterococcus faecalis (VRE) 237266G
Entfaecium Enterococcus faecium 237266H
Parmic Parvimonas micra 237266K
Salsp Salmonella spp. 237266AG

Actual Epic build

Procedure Id 115869
Pdm 237266
Order Display Name Joint Fluid Pathogen Panel, Molecular Detection
Procedure Name JOINT PCR PANEL
Procedure Master Number LAB11813
Short Procedure Name JOINT PCR PANEL
Category Code 4.0
Category Code Record Name LAB MICROBIOLOGY - GENERAL ORDERABLES
Synonyms SYNOVIAL JOINT PCR JOINT INFECTION, INFECTED JOINT, SYNOVIAL SEPTIC ARTHRITIS PROSTHETIC SHOULDER SYNOVIUM KNEE JOINT PCR PANEL HIP
Clinically Active
Orderable
Performable
Filter Genomics
Reference Link Url https://labs.northwell.edu/epic/test/115869
Ordering Instructions
Default Specimen Type Body Fluid
Specimen Type Pick List Body Fluid
Specimen Type List
Op Specimen Type List
Specimen Source Pick List Ankle, Left Ankle, Right Elbow, Left Elbow, Right Finger, Left Finger, Right Foot, Left Foot, Right Hand, Left Hand, Right Hip, Left Hip, Right Jaw, Left Jaw, Right Knee, Left Knee, Right Shoulder, Left Shoulder, Right Toe, Left Toe, Right Vertebra Wrist, Left Wrist, Right
Specimen Source Default - Male
Specimen Source Default - Female
Specimen Source List
Op Specimen Source List
Ip Lab Test Components For Report
Op Lab Test Components For Report
Order Questions []
Order Questions Record Name
Inpatient Order Questions []
Inpatient Order Questions Record Name
Order Specific Question Override
Inpatient Question Override
Location Restrict List Ip
Location Restrict List Ip Record Name
Location Restrict List Include Ip
Location Restrict List Op
Location Restrict List Op Record Name
Location Restrict List Includes Op
Edp Amb Order Specific Questions Record Name
Edp Ip Order Specific Questions Record Name
Edp Ip Specimen Source
Edp Op Specimen Source
Edp Ip Specimen Type
Edp Op Specimen Type
Derived Edp Ip Buttons S
Derived Edp Ip Buttons T
Derived Edp Op Buttons S
Derived Edp Op Buttons T
Ip Orderable 1
Op Orderable 1
EPIC OP AOEs

EPIC IP AOEs

EPIC Components (results)

Component IDComponent NameBase NameCommon NameExternal NameCerner Result PDM
3047801809.0 CITROBACTER SPP. CITROBACTER CITROBACTER SPP. 237266V
3047803584.0 MORGANELLA MORGANII MORGANMORG MORGANELLA MORGANII 237266AC
3047803193.0 KLEBSIELLA PNEUMONIAE GROUP KLEBPNEUM KLEBSIELLA PNEUMONIAE GROUP 237266AB
3047805228.0 VIM (CARBAPENEMASE) VIM VIM (CARBAPENEMASE) 237266AO
3047802074.0 CUTIBACTERIUM AVIDUM/GRANULOSUM CUTIBACAVIGR CUTIBACTERIUM AVIDUM/GRANULOSUM 237266E
3047804025.0 PEPTOSTREPTOCOCCUS ANAEROBIUS PEPTSTREPANA PEPTOSTREPTOCOCCUS ANAEROBIUS 237266M
3047804863.0 STREPTOCOCCUS PYOGENES RAPSCRN STREPTOCOCCUS PYOGENES 237266T
3047803187.0 KINGELLA KINGAE KINGKING KINGELLA KINGAE 237266Z
3047803192.0 KLEBSIELLA AEROGENES KLEBAEROG KLEBSIELLA AEROGENES 237266AA
3047804307.0 PSEUDOMONAS AERUGINOSA PSEUDOMONAS PSEUDOMONAS AERUGINOSA 237266AF
3047802310.0 ENTEROBACTER CLOACAE COMPLEX ENTERBCLCO ENTEROBACTER CLOACAE COMPLEX 237266W
3047804706.0 SERRATIA MARCESCENS SERMARCES SERRATIA MARCESCENS 237266AH
3047802338.0 ESBL ESBL ESBL 237266AQ
3047805511.0 HAEMOPHILUS INFLUENZAE. HAEMINFL HAEMOPHILUS INFLUENZAE. 237266Y
3047802067.0 CTX-M CTXM CTX-M 237266AP
3047801042.0 ANAEROCOCCUS PREVOTII/VAGINALIS ANAERPREVVAG ANAEROCOCCUS PREVOTII/VAGINALIS 237266C
3047802314.0 ENTEROCOCCUS FAECIUM (VRE) ENTERFAECIV ENTEROCOCCUS FAECIUM (VRE) 237266I
3047804297.0 PROTEUS SPP. PROSPP PROTEUS SPP. 237266AE
3047802311.0 ENTEROCOCCUS FAECALIS ENTERFAECA ENTEROCOCCUS FAECALIS 237266F
3047801284.0 BACTEROIDES FRAGILIS BACTERFRAG BACTEROIDES FRAGILIS 237266U
3047804864.0 STREPTOCOCCUS SPP. STREPSPP STREPTOCOCCUS SPP. 237266Q
3047801614.0 CANDIDA SPP. CANDIDA CANDIDA SPP. 237266AI
3047801625.0 CARBAPENEM RESISTANCE CARBAPENRES CARBAPENEM RESISTANCE 237266AR
3047803714.0 NEISSERIA GONORRHOEAE NGONORRH NEISSERIA GONORRHOEAE 237266AD
3047800687.0 STAPHYLOCOCCUS AUREUS STAPHYAUREUS STAPHY AUREUS 237266N
3047803195.0 KPC (CARBAPENEMASE) KPC KPC (CARBAPENEMASE) 237266AL
3047801859.0 CLOSTRIDIUM PERFRINGENS CLOSTRIDIUMP CLOSTRIDIUM PERFRINGENS 237266D
3047802339.0 ESCHERICHIA COLI ESCHERCOLI ESCHERICHIA COLI 237266X
3047803050.0 IMP (CARBAPENEMASE) IMP IMP (CARBAPENEMASE) 237266AK
3047803158.0 JOINT PCR SOURCE JNTPCRSRC JOINT PCR SOURCE 237266A
3047805663.0 STREPTOCOCCUS AGALACTIAE. STREPAGAL STREPAGAL, AGALACTIAE. 237266R
3047802460.0 FINEGOLDIA MAGNA FINEGOLDMA FINEGOLDIA MAGNA 237266J
3047803911.0 OXA-48-LIKE (CARBAPENEMASE) CARBAPENEM OXA-48-LIKE (CARBAPENEMASE) 237266AN
3047804810.0 STAPHYLOCOCCUS LUGDUNENSIS STAPHA STAPHYLOCOCCUS LUGDUNENSIS 237266P
3047803484.0 METHICILLIN RESISTANT S. AUREUS (MRSA) MRSA METHICILLIN RESISTANT S. AUREUS (MRSA) 237266O
3047805665.0 STREPTOCOCCUS PNEUMONIAE. STREPPNEUM STREPPNEUM, PNEUMONIAE. 237266S
3047801609.0 CANDIDA ALBICANS CANDIDA CANDIDA ALBICANS 237266AJ
3047804024.0 PEPTONIPHILUS SPP. PEPTONIPHSPP PEPTONIPHILUS SPP. 237266L
3047803706.0 NDM (CARBAPENEMASE) NDM NDM (CARBAPENEMASE) 237266AM
3047803157.0 JOINT PCR PANEL JOINTPCR JOINT PCR PANEL 237266B
3047802312.0 ENTEROCOCCUS FAECALIS (VRE) ENTERFAECAV ENTEROCOCCUS FAECALIS (VRE) 237266G
3047802313.0 ENTEROCOCCUS FAECIUM ENTERFAECI ENTEROCOCCUS FAECIUM 237266H
3047803973.0 PARVIMONAS MICRA PARVMICRA PARVIMONAS MICRA 237266K
3047804655.0 SALMONELLA SPP. SALSPP SALMONELLA SPP. 237266AG