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| Cerner Primary Mnemonic: | HLX FISH Oncology CASE |
| PDM | 5160520 |
| Informatics - Workgroup | Cytogenetics/FISH |
| Synonyms * | Chronic Myeloid Leukemia (CML)
Myeloproliferative Disorder (MPD)
Myelodysplastic Disorder (MDS) |
| Display Name * | FISH Oncology |
| Specimen Sources (combined Order Entry and Specimen Navigator) * |
Bone Marrow
|
| Specimen Types (combined Order Entry and Specimen Navigator) * |
Bone Marrow
Other
Lymph Node
Tissue
CSF
Blood
Aspirate
|
| Body Fluids (types sent through AOEs) |
|
| Specimen Navigator Specimen Types |
Aspirate
|
| Specimen Navigator Specimen Sources |
Isthmus
Left
Nasal
No Laterality
Right
Total
Abdomen/Peritoneum
Abscess
Adrenal
Amniotic Sac
Anus
Appendix
Axilla
Bile Duct
Bone
Bone Marrow
Brain
Breast
Bronchial
Buccal
Colon
Duodenum
Ear
Esophagus
Extranodal Lymphoid
Eye
Fallopian Tube
Gallbladder
Gingiva
Ileum
Jejunum
Joint
Kidney
Larynx
Liver
Lung
Lymph Node
Mediastinum
Meninges/Dura
Misc
Muscle
Nasopharynx
Nipple
Nose
Oropharynx/Throat
Ovary
Palate
Pancreas
Pancreatic Duct
Parathyroid
Paratubal Cyst
Pelvic
Penis
Pericardium
Pharynx
Pleura
Prostate
Rectum
Retroperitoneum
Salivary Gland
Sinus
Skin
Soft Tissue
Spleen
Stomach
Testis
Thymus
Thyroid
Tongue
Tonsil
Trachea
Uterus
Vagina
Vas Deferens
Vascular
Vulva
Wound Deep
|
| Specimen Navigator Short Name | FISH ONCOLOGY |
| Ordering info (EPIC SmartText) | The following panels can be performed on peripheral blood and bone marrow specimens:
1. Myeloproliferative Disorder (MPD) Probes:
PDGRA/FIP1L1 fusion
CHIC2 del(4q12)
PDGFRB
FGFR1 (8p11.2) cep 8
2. Myelodysplastic Disorder (MDS) Probes:
-5/ deletion 5q
-7/ deletion 7q
CEP8 (Trisomy 8)
Deletion 20q
TP53 (deletion 17p)
3. Chronic Myeloid Leukemia (CML) Probes:
BCR/ABL t(9;22)
4. Acute Myeloid Leukemia (AML) Probes:
-5/ deletion 5q
-7/deletion 7q
RUNX1T1/RUNX1 t(8;21)
KMT2A/MLL (11q23)
PML:RARA t(15;17)
CBFB inv (16)/t(16;16)
TP53 (deletion 17p)
5. Acute Lymphocytic Leukemia (ALL) Probes:
MYC Break Apart t(8q24)
BCR/ABL t(9;22)
KMT2A/MLL (11q23)
ETV6/RUNX1 t(12;21)
6. Multiple Myeloma Panel Probes:
1p32(CDKN2C)/1q21(CKS1B)
FGFR::IGH t(4;14)
CCND1/IGH t(11;14)
RB1 (deletion 13q)
IGH/MAF t(14;16)
TP53 (deletion 17p)
7. S/P Sex Mismatched Bone Marrow transplant Probes:
X,Y
The following panels can be performed on peripheral blood, bone marrow, and lymph node specimens:
8. Chronic Lymphocytic Leukemia (CLL) Probes:
MYB (deletion 6q)
ATM (deletion 11q)
CCND1/IGH t(11;14)
CEP 12 (Trisomy 12)
D13S319/LAMP1 (deletion 13q)
TP53 (deletion 17p)
The following panel can be performed on peripheral blood, bone marrow, lymph node, and Touch prep specimens:
9. Lymphoma Panel Probes:
BCL6 Break Apart t(3q27),
CCND1/IGH t(11;14),
MYC Break Apart t(8q24),
BIRC3/MALT1 t(11;18),
IGH Break Apart (14q32),
IGH/BCL2 t(14;18),
MYC/IGH t(8;14)
The following test can be performed on FFPE slides only:
10. Liposarcoma probes:
MDM2/CEP 12
PEDIATRIC PANELS:
SINGLE PROBES:
CML-BCR::ABL t(9;22)
APL-PML::RARA t(15;17)
S/P Sex Mismatched BM Transplant (X/Y Probes)
Pediatric B-ALL Panel
BCR::ABL t(9;22)
CEP4/CEP10/CEP17
KMT2A (11q23)
ETV6::RUNX1 t(12;21)
Pediatric T-ALL Panel
BCR::ABL t(9;22)
KMT2A/MLL (11q23)
High Risk Pediatric ALL Panel
ABL1
ABL2
PDGFRB
AML Panel
-5/deletion 5q
-7/deletion 7q
RUNX1T1::RUNX1 t(8;21)
KMT2A (11q23)
PML::RARA t(15;17)
CBFB inv(16)/t(16;16)
MDS Panel
-5/deletion 5q
-7/deletion 7q
Trisomy 8
Deletion 20q |
| IP Orderable (inpatient) | Yes |
| OP Orderable (outpatient) | Yes |
AOEs *
|
| AP AOEs | |
| Special History | Yes |
| Build Comments | please pull the last 10 results |
| Filter * | genetics |
| Cerner Site Restrict | |
Cerner Results
| Result Desc |
Result display |
Result PDM |
| TAR PROBE |
TAR PROBE |
5160522 |
| CONTROL |
CONTROL |
5160523 |
| FH RESULTS |
FH RESULTS |
5160524 |
| FH IND |
FH IND |
5160021 |
| FISH KARYO |
FISH KARYO |
5160527 |
| FISH INTER |
FISH INTER |
5160530 |
|
| PROCEDURE ID |
115153 |
| PDM |
5160520 |
| ORDER DISPLAY NAME |
FISH Oncology |
| PROCEDURE NAME |
FISH ONCOLOGY |
| PROCEDURE MASTER NUMBER |
LAB11406 |
| SHORT PROCEDURE NAME |
FISH (ONCOLOGY) |
| CATEGORY CODE |
15.0 |
| CATEGORY CODE RECORD NAME |
LAB CYTOGENETICS ORDERABLES |
| SYNONYMS |
CHRONIC MYELOID LEUKEMIA (CML)
MYELOPROLIFERATIVE DISORDER (MPD)
MYELODYSPLASTIC DISORDER (MDS) |
| CLINICALLY ACTIVE |
Yes |
| ORDERABLE |
Yes |
| PERFORMABLE |
|
| FILTER GENOMICS |
Generic Genomics Procedure |
| REFERENCE LINK URL |
https://labs.northwell.edu/epic/test/115153 |
| ORDERING INSTRUCTIONS |
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| DEFAULT SPECIMEN TYPE |
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| SPECIMEN TYPE PICK LIST |
Bone Marrow
Blood
Other
Lymph Node
Tissue
Cerebrospinal Fluid
Aspirate |
| SPECIMEN TYPE LIST |
|
| OP SPECIMEN TYPE LIST |
|
| SPECIMEN SOURCE PICK LIST |
Abdominal Wall
Alveoli
Amniotic Sac
Ankle, Left
Ankle, Right
Anus
Arm, Left
Arm, Right
Autopsy
Axilla, Left
Axilla, Right
Back, Lower
Back, Upper
Brain, Amygdala
Brain, Basal Ganglia
Brain, Cerebellum
Brain, Cerebral Cortex
Brain, Hypothalamus
Brain, Medulla
Brain, Pons
Breast, Left
Breast, Left Central
Breast, Right
Breast, Right Central
Buttock, Left
Buttock, Right
Cervix
Cheek
Chest, Left
Chest, Right
Chin
Diaphragm
Ear, Left
Ear, Right
Elbow, Left
Elbow, Right
Esophagus
Eye, Left
Eye, Right
Fallopian Tube, Left
Fallopian Tube, Right
Fetus
Foot, Left
Foot, Right
Forearm, Left
Forearm, Right
Forehead
Foreskin
Gallbladder
Hand, Digit Left
Hand, Digit Right
Hand, Left
Hand, Right
Hip, Left
Hip, Right
Kidney, Left
Kidney, Right
Knee, Left
Knee, Right
Appendix
Colon, Cecum
Large Intestine, Left/Descending Colon
Large Intestine, Rectum
Ascend Colon
Sigmoid Colon
Transverse Colon
Larynx
Leg, Left
Leg, Right
Lip, Lower
Lip, Upper
Liver
Lung, Left Lower Lobe
Lung, Left Upper Lobe
Lung, Right Lower Lobe
Lung, Right Middle Lobe
Lung, Right Upper Lobe
Mediastinum
Meninges/Dura
Naris, Left
Naris, Right
Nasal/Nasopharynx
Neck
Oral Cavity
Oropharynx
Ostomy Pouch
Misc
Ovary, Left
Ovary, Right
Pancreas
Penis
Pericardium
Placenta
Prostate
Retroperitoneum
Scalp
Scrotum
Shoulder, Left
Shoulder, Right
Small Intestine, Duodenum
Small Intestine, Ileum
Small Intestine, Jejunum
Spinal Cord
Spine, Cervical
Spine, Lumbar
Sacral
Thoracic
Spleen
Sympathetic Ganglion
Testicular Appendage
Testis, Left
Testis, Right
Thigh, Left
Thigh, Right
Thymus
Thyroid
Toe, Left
Toe, Right
Tongue
Trachea
Blood, Cord
Ureter, Left
Ureter, Right
Urethra
Bladder
Vagina
Vas Deferens, Left
Vas Deferens, Right
Vulva
Wrist, Left
Wrist, Right
Blood, Arterial
Blood, Capillary
Blood, Central Line
Blood, Venous
CSF Reservoir
Lumbar Puncture
VP Shunt Aspirate
Uterus
Nose
Throat
Heart
Stomach
Bone Marrow |
| SPECIMEN SOURCE DEFAULT - MALE |
|
| SPECIMEN SOURCE DEFAULT - FEMALE |
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| SPECIMEN SOURCE LIST |
|
| OP SPECIMEN SOURCE LIST |
|
| IP LAB TEST COMPONENTS FOR REPORT |
HLXFISH:10 |
| OP LAB TEST COMPONENTS FOR REPORT |
HLXFISH:10 |
| ORDER QUESTIONS |
["3048500055", "3045300170", "3045300171", "3045300173"] |
| ORDER QUESTIONS RECORD NAME |
NH IP PANEL YN
NH IP HOME COLLECT DATE
NH IP HOME COLLECT DAYS
NH IP HOME COLLECT MEDICALLY NECESSARY |
| INPATIENT ORDER QUESTIONS |
["3048500055", "3048500000"] |
| INPATIENT ORDER QUESTIONS RECORD NAME |
NH IP PANEL YN |
| ORDER SPECIFIC QUESTION OVERRIDE |
Yes |
| INPATIENT QUESTION OVERRIDE |
|
| LOCATION RESTRICT LIST IP |
|
| LOCATION RESTRICT LIST IP RECORD NAME |
|
| LOCATION RESTRICT LIST INCLUDE IP |
|
| LOCATION RESTRICT LIST OP |
|
| LOCATION RESTRICT LIST OP RECORD NAME |
|
| LOCATION RESTRICT LIST INCLUDES OP |
|
| EDP AMB ORDER SPECIFIC QUESTIONS RECORD NAME |
NH IP PATIENT COMPLETED CONSENT |
| EDP IP ORDER SPECIFIC QUESTIONS RECORD NAME |
NH IP PATIENT COMPLETED CONSENT |
| EDP IP SPECIMEN SOURCE |
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| EDP OP SPECIMEN SOURCE |
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| EDP IP SPECIMEN TYPE |
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| EDP OP SPECIMEN TYPE |
|
| DERIVED EDP IP BUTTONS S |
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| DERIVED EDP IP BUTTONS T |
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| DERIVED EDP OP BUTTONS S |
|
| DERIVED EDP OP BUTTONS T |
|
| IP ORDERABLE |
1 |
| OP ORDERABLE |
1 |
| STANDARD LAB COMPONENTS |
|
| STANDARD LAB COMPONENTS RECORD NAME |
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| COMPONENT DATA REQUIREMENT |
|
EPIC OP AOEs
| Question ID | Question Name | Question | Response Type | Response List | Require Response |
|---|
| 3045300170 |
NH IP HOME COLLECT DATE |
Start Date |
Date |
|
Yes |
| 3045300171 |
NH IP HOME COLLECT DAYS |
Days |
Custom List |
Monday
Tuesday
Wednesday
Thursday
Friday
Saturday
Sunday |
Yes |
| 3045300173 |
NH IP HOME COLLECT MEDICALLY NECESSARY |
Medically Necessary? |
Yes/No |
|
Yes |
| 3048500055 |
NH IP PANEL YN |
Panel: |
Yes/No |
|
Yes |
|
EPIC IP AOEs
| Question ID | Question Name | Question | Response Type | Response List | Require Response |
|---|
| 3048500000 |
NH IP PATIENT COMPLETED CONSENT |
Patient completed consent? |
Yes/No |
|
Yes |
| 3048500055 |
NH IP PANEL YN |
Panel: |
Yes/No |
|
Yes |
|
EPIC Components (results - crosswalked through Cerner)
| Component ID | Component Name | Base Name | Common Name | External Name | Cerner Result PDM |
|---|
| 3048801223.0 |
TARGET PROBE |
TARGETPROBE |
TARGET PROBE |
Target Probe |
5160522 |
| 3048801224.0 |
CONTROL PROBE |
CONTROLPROBE |
CONTROL PROBE |
Control Probe |
5160523 |
| 3048801225.0 |
FISH RESULTS |
FISH |
FISH RESULTS |
Fish Results |
5160524 |
| 3048801226.0 |
FISH INDICATION |
FISH |
FISH INDICATION |
Fish Indication |
5160021 |
| 3048801227.0 |
FISH KARYO |
FISH |
FISH KARYO |
FISH KARYO |
5160527 |
| 3047802872.0 |
HLX FISH ONCOLOGY FINAL REPORT |
HLXFISH |
FISH INTERP |
FISH Interp |
5160530 |
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