EPIC Test Compendium Alpha
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Pneumocystis jirovecii, Molecular Detection

Test Catalog Information

Test Catalog Synonyms
EPIC Synonyms Pneumocystis jiroveci PCR
Cerner Primary MnemonicPneumocystis jiroveci PCR
EPIC Display NamePneumocystis jirovecii, Molecular Detection
Allscripts (AEHR) Order Name

Pneumocystis jiroveci PCR

Sunrise Clinical Manager (SCM) Order Name

Pneumocystis jiroveci PCR

EPIC Inpatient Orderable Yes
EPIC Outpatient Orderable Yes
Cerner Results Specimen Source Pn
Report Status
Pneumocystis PCR
Special Information
Clinical Info

Preferred test for detection of Pneumocystis

Specimen Type

Container

Sterile

Collection Instructions

Specimen must arrive within 7 days of collection; specimens older than 7 days will be rejected. The high sensitivity of amplification by PCR requires the specimen to be processed in an environment in which contamination of the specimen by Pneumocystis species DNA is unlikely. Submit only 1 of the following specimens: Preferred Specimen Type: Body fluid Sources: Pleural Container/Tube: Sterile container Specimen Volume: 1 mL 0.5 mL min) Specimen Type: Respiratory Sources: Bronchoalveolar lavage, bronchial washing, tracheal secretions, or sputum Container/Tube: Sterile container Specimen Volume: 1 mL (0.5 mL min) Specimen Type: Tissue Sources: Respiratory Container/Tube: Sterile container Specimen Volume: 5-10 mm Collection Instructions: 1. Submit fresh tissue. 2. Keep tissue moist with sterile water or sterile saline Acceptable Specimen Type: NALC/NaOH-digested respiratory specimens Sources: Lavage fluid, bronchial washing, respiratory fluid, sputum, or tracheal secretion Container/Tube: Sterile container Specimen Volume: 2 mL Rejection: Body fluid other than pleural fluid, blood, bone, non-respiratory tissue, bone marrow, organ tissues other than lung, paraffin-embedded tissue Specimen in anaerobe vial or viral transport medium Feces Swab Tissue in formalin fluid Urine Specimen;<7 days old

Transport Instructions

Specimen Stability

7 Days Refrigerated 7 Days Frozen

Methodology

Real-Time Polymerase Chain Reaction (PCR)

Days Performed

TAT: 2 -4 Days

Performing Laboratory

Mayo Medical Laboratories

CPT

87798 LOINC Code: 89996-3

PDM

1959069

Desired Epic Build Pneumocystis jirovecii, Molecular Detection

Cerner Primary Mnemonic: Pneumocystis jiroveci PCR
PDM 1959069
Informatics - WorkgroupID Sendouts
Synonyms *Pneumocystis jiroveci PCR
Display Name *Pneumocystis jirovecii, Molecular Detection
Order Entry Specimen Sources *
BAL
Expectorated Sputum
Induced Sputum
Lung LLL
Lung LUL
Lung RLL
Lung RML
Lung RUL
Pleura L
Pleura R
Trachea
Order Entry Specimen Types
Respiratory
Tissue
Specimen Navigator Specimen Types
Specimen Navigator Specimen Sources
Specimen Navigator Short Name
Ordering info (EPIC SmartText)Preferred test for detection of Pneumocystis
IP Orderable Yes
OP Orderable Yes
AOEs *

AP AOEs
Special History No
Build Comments
Filter *micro
Procedure Category Change
Cerner Results

Result DescResult displayResult PDM
Specimen Source Pn Specimen Source Pn 1959069A
Report Status Report Status 1959069D
Pneum PCR Pneumocystis PCR 1959069B
Special Information Special Information 1959069C

Actual Epic build

Procedure Id 111444
Pdm 1959069
Order Display Name Pneumocystis jirovecii, Molecular Detection
Procedure Name PNEUMOCYSTIS JIROVECI PCR
Procedure Master Number LAB10470
Short Procedure Name PNEUMOCYSTIS JIROVECI PCR
Category Code 1.0
Category Code Record Name LAB BLOOD ORDERABLES
Synonyms PNEUMOCYSTIS JIROVECI PCR
Clinically Active
Orderable
Performable
Filter Genomics
Reference Link Url https://labs.northwell.edu/epic/test/111444
Ordering Instructions
Default Specimen Type Respiratory
Specimen Type Pick List Respiratory
Specimen Type List
Op Specimen Type List
Specimen Source Pick List BAL
Specimen Source Default - Male BAL
Specimen Source Default - Female BAL
Specimen Source List
Op Specimen Source List
Ip Lab Test Components For Report
Op Lab Test Components For Report
Order Questions []
Order Questions Record Name
Inpatient Order Questions []
Inpatient Order Questions Record Name
Order Specific Question Override
Inpatient Question Override
Location Restrict List Ip
Location Restrict List Ip Record Name
Location Restrict List Include Ip
Location Restrict List Op
Location Restrict List Op Record Name
Location Restrict List Includes Op
Edp Amb Order Specific Questions Record Name
Edp Ip Order Specific Questions Record Name
Edp Ip Specimen Source Blood, Venous Blood, Central Line Blood, Arterial Blood, Capillary
Edp Op Specimen Source
Edp Ip Specimen Type Blood
Edp Op Specimen Type
Derived Edp Ip Buttons S
Derived Edp Ip Buttons T
Derived Edp Op Buttons S
Derived Edp Op Buttons T
Ip Orderable 1
Op Orderable 1
EPIC OP AOEs

EPIC IP AOEs

EPIC Components (results)

Component IDComponent NameBase NameCommon NameExternal NameCerner Result PDM
3047800642.0 PNEUMOCYSTIS SPECIMEN SOURCE SPECSRCPN SPECIMEN SOURCE PN 1959069A
3047804537.0 REPORT STATUS REPRTSTAT REPORT STATUS 1959069D
3046000000.0 PNEUMOCYSTIS PCR PNEUMOPCR PNEUMOCYSTIS PCR 1959069B
3047804793.0 SPECIAL INFORMATION SPECINFO SPECIAL INFORMATION 1959069C